Calculating Phylogenetic Diversity metrics in MEGAN


#1

Is it possible to include phylogenetic diversity indices (phylogenetic entropy, quadratic entropy, or even balance-weighted phylogenetic diversity as implemented by Erik Matsen in guppy) as well as the Shannon and Simpson metrics from the taxon analysis? Thanks, Andy


#2

Shannon and Simpson are already implemented (or is that what you meant by “as well as”?)
I have added the others to my list of todos.