Problem exporting biom file after SEED annotation


Hello everyone,

I have problems exporting .biom files after I perform SEED annotation. MEGAN creates a file but when I try to upload it to R is says :" Error in validObject(.Object) :
invalid class “biom” object: Some data fields for this dense biom format do not have the expected number columns: 6 "

After I check the file with biom-format, it also says that file is not a valid biom file.

The same files with taxonomy annotation can be exoprted to .biom and are working well. Does anyne know what might be wrong?



Dear Monika,

please give me access to the biom file that you generated and I will look into this