Could you maybe include this format in the export option in another update?
Right now there is readName to taxId, taxonName and taxonPath which would give a similar output. I want to compare the MEGAN output with the result of other pipelines which have the following format - taxonRank, taxId, count.
I can do the direct comparison with just the taxId, but I am missing the connection to the taxonRank to format it into something more human-readable.
Or can you point me to the database (file) which contains taxonRank and taxId relationships, then I could just parse it out myself?
Unfortunately readName_to_taxonName is not specific enough because several ranks can have the same name and they all get collapsed to a single entry.